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Speed up MySQL query with IN clause

I've tried to improve the speed of my query in MySQL, but when condition IN clause happens too often, the query runs very slowly. Can anyone help me optimize the query?

EXPLAIN SELECT bi.syouhin_sys_code AS syouhin_sys_code     
    ,dwh_syo.name AS syouhin_sys_name     
    ,dwh_syo.code AS syouhin_code     
    ,dwh_syo.brand_code AS brand_code     
    ,brand.name AS brand_name     
    ,bi.bunrui_code AS bunrui_code     
    ,bunrui.bunrui_name AS bunrui_name     
    ,SUM(bi.syouhin_count) AS syouhin_count     
    ,CASE WHEN dwh_syo.teika = 0       
       THEN 0 ELSE IFNULL(TRUNCATE((sik.price / (dwh_syo.teika * 100 / 105)) * 100, 2), 0)      
     END AS siire_rate       
    ,SUM(bi.jyutyuu_teika) AS jyutyuu_teika     
    ,SUM(bi.jyutyuu_hanbai) AS jyutyuu_hanbai     
    ,SUM(bi.jyutyuu_sikiri) AS jyutyuu_sikiri     
    ,SUM(bi.jyutyuu_hanbai) - SUM(bi.jyutyuu_sikiri) AS jyutyuu_profit     
    ,CASE WHEN SUM(bi.jyutyuu_hanbai) = 0       
        THEN 0 ELSE TRUNCATE(((SUM(bi.jyutyuu_hanbai) - SUM(bi.jyutyuu_sikiri)) / SUM(bi.jyutyuu_hanbai) * 100),2)      
     END  AS jyutyuu_profit_rate         
    ,SUM(bi.nouhin_teika) AS nouhin_teika     
    ,SUM(bi.nouhin_hanbai) AS nouhin_hanbai     
    ,SUM(bi.nouhin_sikiri) AS nouhin_sikiri     
    ,SUM(bi.nouhin_hanbai) - SUM(bi.nouhin_sikiri) AS nouhin_profit     
    ,CASE WHEN SUM(bi.nouhin_hanbai) = 0       
        THEN 0 ELSE TRUNCATE(((SUM(bi.nouhin_hanbai) - SUM(bi.nouhin_sikiri)) / SUM(bi.nouhin_hanbai) * 100),2)      
     END AS nouhin_profit_rate     
    ,CONCAT(CASE WHEN sel.hyouji_name1 IS NULL OR sel.hyouji_name1 = '' 
                THEN '' ELSE sel.hyouji_name1 
             END         
            ,CASE WHEN sel.hyouji_name2 IS NULL OR sel.hyouji_name2 = '' 
                THEN '' ELSE CONCAT('/',sel.hyouji_name2) 
             END         
            ,CASE WHEN sel.hyouji_name3 IS NULL OR sel.hyouji_name3 = '' 
                THEN '' ELSE CONCAT('/',sel.hyouji_name3) 
             END         
            ,CASE WHEN sel.hyouji_name4 IS NULL OR sel.hyouji_name4 = '' 
                THEN '' ELSE CONCAT('/',sel.hyouji_name4) 
             END            
            ,CASE WHEN sel.hyouji_name5 IS NULL OR sel.hyouji_name5 = '' 
                THEN '' ELSE CONCAT('/',sel.hyouji_name5) 
             END            
            ,CASE WHEN sel.hyouji_name6 IS NULL OR sel.hyouji_name6 = '' 
                THEN '' ELSE CONCAT('/',sel.hyouji_name6) 
             END) AS syouhin_spec  
FROM bi_bunrui_syouhin_shop_day_jyutyuu AS bi           
    LEFT OUTER JOIN dwh_rc_syouhin AS dwh_syo 
        ON bi.syouhin_sys_code = dwh_syo.syouhin_sys_code      
    LEFT OUTER JOIN tbl_sikiri_now AS sik 
        ON bi.syouhin_sys_code = sik.syouhin_sys_code      
    LEFT OUTER JOIN mst_syouhin_all_select AS sel 
        ON bi.syouhin_sys_code = sel.syouhin_sys_code      
    LEFT OUTER JOIN mst_brand AS brand 
        ON dwh_syo.brand_code = brand.brand_code      
    LEFT OUTER JOIN mst_bunrui AS bunrui 
        ON bi.bunrui_code = bunrui.bunrui_code  
WHERE bi.tyumon_date_unixtime BETWEEN UNIX_TIMESTAMP(20121001) 
    AND UNIX_TIMESTAMP(20130603) 
    AND( bi.syouhin_sys_code LIKE '%%' OR     dwh_syo.name  LIKE '%%' ) 
    AND bi.shop_code IN ('0000','0001','0002','0009','0003','0006','9000','9001') 
    AND bi.bunrui_code IN ('0001','1000','1001','1005','1006','1007','1008','1009'
        ,'1010','1011','1012','1013','1014','1015','1016','1017',
        '1018','1020','1021','1022','1023','1030','1031','1032'
        ,'1033','1034','1036','1037','1038','1039','1040','1041'
        ,'1043','1044','1045','1046','1050','1054','1055','1060'
        ,'1061','1070','1080','1081','1082','1083','1084','1085','1086'
        ,'1088','1090','1091','1092','1093','1094','1095','1096','1097'
        ,'1100','1101','1102','1103','1104','1105','1106','1107','1108'
        ,'1109','1110','1111','1112','1113','1114','1115','1116','1117'
        ,'1118','1119','1120','1121','1122','1123','1130','1131','1132'
        ,'1133','1134','1135','1136','1137','1140','1141','1142','1143'
        ,'1145','1148','1150','1151','1152','1153','1154','1155','1156'
        ,'1157','1160','1161','1162','1163','1164','1165','1166','1167'
        ,'1168','1169','1170','1171','1180','1181','1182','1183','1184'
        ,'1187','1189','1200','1201','1202','1203','1204','1205','1206'
        ,'1207','1210','1211','1212','1220','2003','2009','2022','2028'
        ,'2042','2048','2062','2068','2082','2088','2102','2108','2122'
        ,'2125','2128','2129','2134','2141','2144','2161','2182','2186'
        ,'2222','2228','2242','2253','2262','2268','2302','2511','2512'
        ,'2513','3180','3207','3208','4023','4024','4028','4029','4030'
        ,'4031','4032','4033','4034','4036','4040','4041','4042','4043'
        ,'4044','4062','4064','4066','4067','4068','4069','4070','4071'
        ,'4092','5013','5014','5015','5016','5017','5018','6200','6201'
        ,'6202','6203','6204','6205','6220','6221','6222','6223','6224'
        ,'6225','6226','6234','6235','6240','6241','6242','6243','6244'
        ,'6245','6246','6247','6249','6250','6251','6260','6261','6262'
        ,'6263','6264','6265','6280','6281','6282','6283','6284','6285'
        ,'6286','6287','6288','6289','6290','6291','6292','6293','6300'
        ,'6301','6302','6303','6304','6305','6320','6321','6322','6323'
        ,'6324','6325','6340','6342','6343','6344','6345','6346','6347'
        ,'6348','6349','6360','6361','6362','6363','6364','6365','6366'
        ,'6367','6368','6369','6371','6372','6373','6374','6375','6376'
        ,'6377','6378','6379','6380','6381','6382','6383','6384','6385'
        ,'6400','6401','6402','6403','6406','6407','6408','6420','6421'
        ,'6422','6423','6424','6425','6426','6427','6428','6429','6430'
        ,'6431','6432','6433','6434','6435','6436','6440','6441','6442'
        ,'6443','6444','6445','6446','6447','6448','6449','6450','6451'
        ,'6452','6453','6454','6455','6456','6457','6458','6459','6460'
        ,'6470','6471','6472','6473','6474','6475','6476','6477','6478'
        ,'6480','6481','6482','6483','6484','6485','6486','6487','6489'
        ,'6490','6500','6501','6502','6504','6505','6506','6507','6508'
        ,'6509','6510','6511','6512','6513','6514','6515','6520','6521'
        ,'6522','6523','6524','6525','6526','6527','6528','6529','6530'
        ,'6531','6550','6551','6552','6553','6554','6555','6556','6557'
        ,'6558','6559','6560','6561','6562','6563','6564','6565','6567'
        ,'6568','6569','6570','6572','6573','6574','7694','7993','9200'
        ,'9201','9202','9203','9204','9205','9206','9208','9310','9320')  
GROUP BY bi.syouhin_sys_code  
HAVING SUM(bi.syouhin_count) > 0  
ORDER BY jyutyuu_hanbai DESC

This is the statement that makes the query run slowly:

AND bi.bunrui_code IN ('0001','1000','1001',...)

Here is the EXPLAIN results:

id  select_type table   type    possible_keys   key key_len ref rows Extra
1   SIMPLE  bi  range   PRIMARY PRIMARY 12  NULL    256360  Using where; Using temporary; Using filesort
1   SIMPLE  dwh_syo eq_ref  PRIMARY PRIMARY 8   analyst.bi.syouhin_sys_code 1   Using where
1   SIMPLE  sik eq_ref  PRIMARY,syouhin_sys_code,idx_syouhin_sys_code   PRIMARY 8   analyst.bi.syouhin_sys_code 1   
1   SIMPLE  sel eq_ref  PRIMARY PRIMARY 8   analyst.bi.syouhin_sys_code 1   
1   SIMPLE  brand   eq_ref  PRIMARY PRIMARY 4   analyst.dwh_syo.brand_code  1   
1   SIMPLE  bunrui  eq_ref  PRIMARY PRIMARY 8   analyst.bi.bunrui_code  1

The run time is more than 16s.